What I do is start with a paper drawing, using my barrel, lock, and trigger, just like drawing a plan for a long rifle. You’re right, you need to determine where your parts go first. Then transfer the drawing to a piece of pine 1x6, bandsaw it out, and drive a finish nail where the trigger is located. Then, play with the “try stock” until it fits your hand, rasping off, or glueing on, until you’re satisfied...then you have a stock pattern. Just how I tackle pistols, YMMV.
Greg